Twin Cities campus

This is archival data. This system was retired as of August 21, 2023 and the information on this page has not been updated since then. For current information, visit catalogs.umn.edu.

 
Twin Cities Campus

Chemistry M.S.

Chemistry
College of Science and Engineering
Link to a list of faculty for this program.
Contact Information
Assistant to the Director of Graduate Studies, Department of Chemistry, University of Minnesota, 137 Smith Hall, 207 Pleasant St SE, Minneapolis, MN 55455 (612-626-7444 or 1-800-777-2431; fax: 612-626-7541)
  • Program Type: Master's
  • Requirements for this program are current for Fall 2024
  • Length of program in credits: 30
  • This program does not require summer semesters for timely completion.
  • Degree: Master of Science
Along with the program-specific requirements listed below, please read the General Information section of this website for requirements that apply to all major fields.
While modern research in chemistry is very interdisciplinary, graduate work in the Department of Chemistry falls broadly into the focus areas of analytical chemistry, chemical biology, environmental chemistry, inorganic chemistry, materials chemistry, organic chemistry, polymer chemistry, experimental physical chemistry, and computational chemistry.
Program Delivery
  • via classroom (the majority of instruction is face-to-face)
Prerequisites for Admission
The preferred undergraduate GPA for admittance to the program is 3.20.
An undergraduate degree in chemistry or a related field is required for admission.
Other requirements to be completed before admission:
Applicants must offer the substantial equivalent of the courses in analytical, inorganic, organic, and physical chemistry that are required of undergraduate majors in the University of Minnesota chemistry curriculum. They must also have at least one year of college physics, plus college mathematics through calculus.
Special Application Requirements:
Applications for fall semester must be completed by December 1 in order to be considered for fellowship support and teaching and research assistantships. Applications received after December 1 will be reviewed on a space available basis. The department prefers to admit for fall semester and will only consider spring admission under extenuating circumstances.
International applicants must submit score(s) from one of the following tests:
  • TOEFL
    • Internet Based - Total Score: 95
    • Internet Based - Speaking Score: 23
  • IELTS
    • Total Score: 7.0
  • MELAB
    • Final score: 83
Key to test abbreviations (TOEFL, IELTS, MELAB).
For an online application or for more information about graduate education admissions, see the General Information section of this website.
Program Requirements
Plan A: Plan A requires 20 major credits, up to credits outside the major, and 10 thesis credits. The final exam is oral.
Plan B: Plan B requires 30 major credits and up to credits outside the major. The final exam is written. A capstone project is required.
Capstone Project:Each Plan B project should involve a combined total of approximately 160 hours (the equivalent of four full-time weeks) of library research, reading, and/or writing resulting in the preparation of a significant written document. Students who plan to work on Plan B projects independent of the Preliminary Examination should present a plan, after consultation with the chosen instructor for the Plan B project, outlining the number and content of their projects to the director of graduate studies. Projects should be completed to the satisfaction of the instructor; the final grade is determined by the instructor.
Plan C: Plan C requires 30 major credits and up to credits outside the major. There is no final exam.
This program may be completed with a minor.
Use of 4xxx courses toward program requirements is permitted under certain conditions with adviser approval.
A minimum GPA of 2.80 is required for students to remain in good standing.
Courses must be taken on the A-F grade basis, unless only offered S/N. All CHEM courses must be taken at the 5xxx or 8xxx level. A maximum of 8 credits in 4xxx-level courses from another department may be used with approval from the director of graduate studies.
Required Courses (2 credits)
Take CHEM 8601 in fall or spring the first year of study; take CHEM 8066 in spring of the first year.
CHEM 8066 - Professional Conduct of Chemical Research (1.0 cr)
CHEM 8601 - Seminar: Modern Problems in Chemistry (1.0 cr)
Major Courses (18 to 28 credits)
Plan A students select 18 credits, Plan B students select 20 credits, and Plan C students select 28 credits from the following list. Other courses may be applied to this requirement with advisor approval.
BIOC 4331 - Biochemistry I: Structure, Catalysis, and Metabolism in Biological Systems (4.0 cr)
BIOC 4332 - Biochemistry II: Molecular Mechanisms of Signal Transduction and Gene Expression (4.0 cr)
BIOC 5351 - Protein Engineering (3.0 cr)
BIOC 8005 - Biochemistry: Structure and Catalysis (2.0 cr)
BIOC 8102 - Hot Topics in the Biology of Aging (1.0 cr)
BIOL 4004 - Cell Biology (3.0 cr)
CEGE 8542 - Chemistry of Organic Pollutants in Environmental Systems (3.0 cr)
CHEM 5210 - Materials Characterization (4.0 cr)
CHEM 5755 - X-Ray Crystallography (4.0 cr)
CHEM 8011 - Mechanisms of Chemical Reactions (4.0 cr)
CHEM 8021 - Computational Chemistry (4.0 cr)
CHEM 8151 - Analytical Separations and Chemical Equilibria (4.0 cr)
CHEM 8152 - Analytical Spectroscopy (4.0 cr)
CHEM 8153 - Extracting Signal From Noise (5.0 cr)
CHEM 8155 - Advanced Electroanalytical Chemistry (4.0 cr)
CHEM 8157 - Bioanalytical Chemistry (4.0 cr)
CHEM 8201 - Materials Chemistry (4.0 cr)
CHEM 8211 - Physical Polymer Chemistry (4.0 cr)
CHEM 8221 - Synthetic Polymer Chemistry (4.0 cr)
CHEM 8280 - Special Topics in Materials Chemistry (2.0-4.0 cr)
CHEM 8321 - Organic Synthesis (4.0 cr)
CHEM 8322 - Advanced Organic Chemistry (4.0 cr)
CHEM 8352 - Physical Organic Chemistry (4.0 cr)
CHEM 8361 - Interpretation of Organic Spectra (4.0 cr)
CHEM 8380 - Special Topics in Organic Chemistry (1.0-4.0 cr)
CHEM 8411 - Introduction to Chemical Biology (4.0 cr)
CHEM 8412 - Chemical Biology of Enzymes (4.0 cr)
CHEM 8413 - Nucleic Acids (4.0 cr)
CHEM 8480 - Special Topics in Biological Chemistry (2.0-4.0 cr)
CHEM 8541 - Dynamics (4.0 cr)
CHEM 8551 - Quantum Mechanics I (4.0 cr)
CHEM 8552 - Quantum Mechanics II (2.0 cr)
CHEM 8561 - Thermodynamics, Statistical Mechanics, and Reaction Dynamics I (4.0 cr)
CHEM 8562 - Thermodynamics, Statistical Mechanics, and Reaction Dynamics II (4.0 cr)
CHEM 8563 - Molecular Simulations (2.0 cr)
CHEM 8564 - Laser Spectroscopy (2.0 cr)
CHEM 8565 - Chemical Reaction Dynamics (2.0 cr)
CHEM 8566 - Spin Dynamics (2.0 cr)
CHEM 8567 - Biophysical Chemistry (2.0 cr)
CHEM 8568 - Chemical Bonding at Surfaces (2.0 cr)
CHEM 8569 - Electronic Structure (2.0 cr)
CHEM 8580 - Special Topics in Physical Chemistry (2.0-4.0 cr)
CHEM 8715 - Physical Inorganic Chemistry (4.0 cr)
CHEM 8725 - Organometallic Chemistry (4.0 cr)
CHEM 8735 - Bioinorganic Chemistry (4.0 cr)
CHEM 8745 - Advanced Inorganic Chemistry (4.0 cr)
CHEM 8780 - Special Topics in Inorganic Chemistry (2.0-4.0 cr)
CHEM 8880 - Special Topics in Chemistry (2.0-4.0 cr)
CHEN 5771 - Colloids and Dispersions (3.0 cr)
CHEN 8754 - Systems Analysis of Biological Processes (3.0 cr)
CSCI 4041 - Algorithms and Data Structures (4.0 cr)
CSCI 5521 - Machine Learning Fundamentals (3.0 cr)
CSCI 5525 - Machine Learning: Analysis and Methods (3.0 cr)
EE 5640 - Introduction to Nano-Optics (3.0 cr)
ESCI 8401 - Aqueous Environmental Geochemistry (3.0 cr)
MATS 5517 - Microscopy of Materials (3.0 cr)
MATS 8003 - Electronic Properties (3.0 cr)
MATS 8103 - Scattering from Soft Matter (2.0 cr)
ME 8362 - Introduction to Plasma Technology (3.0 cr)
MEDC 8001 - General Principles of Medicinal Chemistry (3.0 cr)
MEDC 8002 - General Principles of Medicinal Chemistry (3.0 cr)
MEDC 8070 - The Chemistry and Biology of Infectious Diseases (3.0 cr)
MEDC 8435 - BioAssay & Data Analysis (1.0 cr)
MEDC 8461 - Design of Cancer Therapeutics (3.0 cr)
MEDC 8753 - MOLECULAR TARGETS OF DRUG DISCOVERY (3.0 cr)
MICA 8004 - Cellular and Cancer Biology (4.0 cr)
MICA 8009 - Biochemical Aspects of Normal and Abnormal Cell Growth and Cell Death (2.0 cr)
MICB 4171 - Biology, Genetics, and Pathogenesis of Viruses (3.0 cr)
PHYS 8001 - Advanced Quantum Mechanics (3.0 cr)
PHYS 8711 - Solid-State Physics I (3.0 cr)
PUBH 6414 - Biostatistical Literacy (3.0 cr)
PUBH 6450 - Biostatistics I (4.0 cr)
STAT 5021 - Statistical Analysis (4.0 cr)
Plan Options
Plan A
Take 10 master's thesis credits.
CHEM 8777 - Thesis Credits: Master's (1.0-18.0 cr)
-OR-
Plan B (8 credits)
Take each of the following project courses for 4 credits:
CHEM 8081 - M.S. Plan B Project I (1.0-4.0 cr)
CHEM 8082 - M.S. Plan B Project II (1.0-4.0 cr)
 
More program views..
View college catalog(s):
· College of Science and Engineering

View PDF Version:
Search.
Search Programs

Search University Catalogs
Related links.

College of Science and Engineering

Graduate Admissions

Graduate School Fellowships

Graduate Assistantships

Colleges and Schools

One Stop
for tuition, course registration, financial aid, academic calendars, and more
 
CHEM 8066 - Professional Conduct of Chemical Research
Credits: 1.0 [max 1.0]
Grading Basis: S-N or Aud
Typically offered: Every Fall & Spring
Builds sensitivity to ethical issues in chemical research. Readings/case studies, small-group/large-group discussion, summarizing comments from instructors/guests/panels having special expertise. Weekly seminar. prereq: Chem grad student
CHEM 8601 - Seminar: Modern Problems in Chemistry
Credits: 1.0 [max 1.0]
Grading Basis: S-N or Aud
Typically offered: Every Fall & Spring
Weekly seminar series on modern chemical topics. prereq: grad chem major or instr consent
BIOC 4331 - Biochemistry I: Structure, Catalysis, and Metabolism in Biological Systems
Credits: 4.0 [max 4.0]
Course Equivalencies: BioC 3021/BioC 3022/BioC 4331/
Typically offered: Every Fall & Spring
Advanced survey of structure/catalysis, metabolism/bioenergetics. prereq: (BIOL 1009 or 2003 or equiv) AND (Chem 2302 or CHEM 2081/2085 or equiv)
BIOC 4332 - Biochemistry II: Molecular Mechanisms of Signal Transduction and Gene Expression
Credits: 4.0 [max 4.0]
Typically offered: Every Fall & Spring
Advanced survey of molecular biology. Mechanisms of gene action/biological regulation. prereq: BioC 4331 or Bioc 3201 or BioC 3022
BIOC 5351 - Protein Engineering
Credits: 3.0 [max 3.0]
Grading Basis: A-F or Aud
Typically offered: Every Fall
Key properties of enzymes/molecular basis, computer modeling strategies, mutagenesis strategies to create protein variants, expression/screening of protein variants. Evaluate research papers, identify unsolved practical/theoretical problems, plan protein engineering experiment.
BIOC 8005 - Biochemistry: Structure and Catalysis
Credits: 2.0 [max 2.0]
Grading Basis: A-F or Aud
Typically offered: Every Fall
Protein structure, methods to determine structure, protein folding, forces stabilizing macromolecular structure, protein engineering, design. Dynamic properties of proteins/enzymes, enzyme substrate complexes, mechanism of enzyme catalysis.
BIOC 8102 - Hot Topics in the Biology of Aging
Credits: 1.0 [max 1.0]
Typically offered: Spring Odd Year
This course is intended to provide a platform of understanding about the major issues surrounding biological research in aging. This course will include a combination of student- and faculty-led discussions on select research topics that are highly relevant to the field of biogerontology research, along with instruction/discussions on scientific integrity. Student participants will lead discussions focused on their area of research expertise, utilizing a combination of review articles and research articles. Discussion of scientific misconduct will include case studies. This course is open to graduate students and post-doctoral fellows involved in the National Institutes on Aging (NIA) training grant ?Functional Proteomics of Aging?. This course is also open to other graduate students or post-doctoral fellows who are conducting biological research in aging with instructor?s permission.
BIOL 4004 - Cell Biology
Credits: 3.0 [max 3.0]
Course Equivalencies: Biol 4004/GCD 3033/4005W
Typically offered: Every Fall, Spring & Summer
Processes fundamental to cells. Emphasizes eukaryotic cells. Assembly/function of membranes/organelles. Cell division, cell form/movement, intercellular communication, transport, secretion pathways. Cancer cells, differentiated cells. prereq: Completion of Biol 4003 is preferred, Biol2003/2003H or Biol4003 or grad
CEGE 8542 - Chemistry of Organic Pollutants in Environmental Systems
Credits: 3.0 [max 3.0]
Grading Basis: A-F or Aud
Typically offered: Periodic Fall & Spring
Structural characteristics and physico-chemical properties of organic contaminants in aquatic systems. Emphasizes PCBs, PAHs, dioxins, insecticides, herbicides, and chlorinated solvents. Factors affecting their transport/transformation. Structure- and property-activity relationships, their use in predicting organic chemical behavior. prereq: CEGE 5541 or instr consent
CHEM 5210 - Materials Characterization
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Modern tools/techniques for both bulk- and thin-film characterization. Topics may include ion-solid interactions, Rutherford back scattering, secondary ion mass spectrometry, solid-state NMR, x-ray photoelectron spectroscopy, small-angle x-ray/neutron scattering, transmission/scanning electron/probe microscopy, near-field scanning optical microscopy, porosimetry, adsorption techniques, and ellipsometry. prereq: grad student or instr consent
CHEM 5755 - X-Ray Crystallography
Credits: 4.0 [max 4.0]
Grading Basis: A-F or Aud
Typically offered: Every Spring
Essentials of crystallography as applied to modern, single crystal X-ray diffraction methods. Practical training in use of instrumentation in X-ray crystallography facility in Department of Chemistry. Date collection, correction/refinement, structure solutions, generation of publication materials, use of Cambridge Crystallographic Structure Database. prereq: Chem grad student or instr consent
CHEM 8011 - Mechanisms of Chemical Reactions
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Reaction mechanisms and methods of study. Mechanistic concepts in chemistry. Gas phase reactions to mechanisms, "electron pushing" mechanisms in organic reactions, mechanism of enzymatic reactions. Kinetic schemes and other strategies to investigate mechanisms. prereq: 2302 or equiv
CHEM 8021 - Computational Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Modern theoretical methods used in study of molecular structure, bonding, reactivity. Concepts/practical applications. Determination of spectra, relationship to experimental techniques. Molecular mechanics. Critical assessment of reliability of methods. prereq: 4502 or equiv
CHEM 8151 - Analytical Separations and Chemical Equilibria
Credits: 4.0 [max 4.0]
Typically offered: Every Fall & Spring
Advanced treatment of principles of analytical chemistry, chemical equilibria, and dynamics. Chromotographic and other modern analytical scale separation techniques. Emphasizes column dynamics and retention mechanisms. prereq: instr consent
CHEM 8152 - Analytical Spectroscopy
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Survey of analytical spectroscopic methods. Design/application of spectroscopic instruments, including signal generation, acquisition, and interpretation. May include nuclear magnetic resonance, electron paramagnetic resonance, infrared and ultraviolet/visible spectroscopy, and mass spectrometry. prereq: grad chem major or instr consent
CHEM 8153 - Extracting Signal From Noise
Credits: 5.0 [max 5.0]
Grading Basis: A-F or Aud
Typically offered: Every Spring
Use of analog/digital electronics and computational methods in experiments. Passive circuits, operational amplifiers, filters, oscillators and Laplace transform techniques in analysis, domain conversion for data acquisition/control, statistics, experimental design. Introduction to chemometrics, Fourier analysis, convolution/deconvolution, curve fitting. prereq: [4101 or equiv], differential equations course
CHEM 8155 - Advanced Electroanalytical Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Thermodynamics/kinetics of electron/ion transfer, electric double layer, mass transfer by diffusion/migration. Ion-selective potentiometry, chronoamperometry, chronocoulometry, cyclic voltammetry, pulse voltammetry, ion-transfer voltammetry, impedance spectroscopy, bioelectroanalysis, rotating disk electrodes, microelectrodes, chemically modified electrodes. Scanning electrochemical microscopy. EC-STM, quartz crystal microbalance.
CHEM 8157 - Bioanalytical Chemistry
Credits: 4.0 [max 4.0]
Grading Basis: A-F or Aud
Typically offered: Periodic Spring
Theory and practical aspects of analytical methods used in determination/characterization of biologically important materials. Enzymatic/kinetic methods in study of proteins, carbohydrates, lipids, and nucleic acids.
CHEM 8201 - Materials Chemistry
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 4201/Chem 8201
Grading Basis: A-F or Aud
Typically offered: Every Fall
Crystal systems/unit cells, phase diagrams, defects/interfaces, optical/ dielectric properties, electrical/thermal conductivity, X-ray diffraction, thin film analysis, electronic structure, polarons/phonons, solid state chemistry, liquid/molecular crystals, polymers, magnetic/optical materials, porous materials, ceramics, piezoelectric materials, biomedical materials, catalysts. prereq: [4701, 3502] or instr consent
CHEM 8211 - Physical Polymer Chemistry
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 8211/ChEn 8211/MatS 8211
Typically offered: Every Spring
Chain conformations. Thermodynamics of polymer solutions, blends, and copolymers. Light, neutron, and X-ray scattering. Dynamics in dilute solution and polymer characterization and in melts and viscoelasticity. Rubber elasticity, networks, gels. Glass transition. crystallization. prereq: Undergrad physical chem course
CHEM 8221 - Synthetic Polymer Chemistry
Credits: 4.0 [max 4.0]
Course Equivalencies: ChEn 8221/MatS 8221/Chem 8221
Typically offered: Every Fall
Condensation, radical, ionic, emulsion, ring-opening, metal-catalyzed polymerizations. Chain conformation, solution thermodynamics, molecular weight characterization, physical properties. prereq: [Undergrad organic chemistry course, undergrad physical chemistry course] or instr consent
CHEM 8280 - Special Topics in Materials Chemistry
Credits: 2.0 -4.0 [max 4.0]
Typically offered: Periodic Fall & Spring
Topics (and availability) vary by year depending on instructor and development of the field. prereq: Grad chem major or instr consent
CHEM 8321 - Organic Synthesis
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Core course; fundamental concepts, reactions, reagents, structural and stereochemical issues, and mechanistic skills necessary for understanding organic chemistry. prereq: 2302 or equiv
CHEM 8322 - Advanced Organic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Modern studies. Topics, which vary by year, include natural products, heterocycles, asymmetric synthesis, organometallic chemistry, and polymer chemistry. prereq: 2302 or equiv
CHEM 8352 - Physical Organic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Fundamental concepts, mechanistic tools for analyzing organic reaction mechanisms. Solvation, reactive intermediates, gas phase chemistry, photochemistry, strained-ring chemistry. prereq: 4011 or 8011
CHEM 8361 - Interpretation of Organic Spectra
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Practical application of nuclear magnetic resonance, mass, ultraviolet, and infrared spectral analyses to solution of organic structural problems. prereq: 2302 or equiv
CHEM 8380 - Special Topics in Organic Chemistry
Credits: 1.0 -4.0 [max 4.0]
Typically offered: Periodic Spring
Topics (and availability) vary by year depending on instructor and development of the field. prereq: grad chem major or instr consent
CHEM 8411 - Introduction to Chemical Biology
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Chemistry of amino acids, peptides, proteins, lipids, carbohydrates, and nucleic acids. Structure, nomenclature, synthesis, and reactivity. Overview of techniques used to characterize these biomolecules. prereq: 2302 or equiv
CHEM 8412 - Chemical Biology of Enzymes
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 8412/MedC 8412
Typically offered: Periodic Spring
Enzyme classification with representative examples from current literature. Strategies used to decipher enzyme mechanisms. Chemical approaches for control of enzyme catalysis. prereq: 2302 or equiv
CHEM 8413 - Nucleic Acids
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 8413/MedC 8413
Typically offered: Periodic Fall
Chemistry and biology of nucleic acids: structure, thermodynamics, reactivity, DNA repair, chemical oligonucleotide synthesis, antisense approaches, ribozymes, overview of techniques used in nucleic acid research, interactions with small molecules and proteins. prereq: 2302 or equiv
CHEM 8480 - Special Topics in Biological Chemistry
Credits: 2.0 -4.0 [max 4.0]
Typically offered: Periodic Spring
Topics (and availability) vary by year, depending on instructor and development of the field. prereq: Grad chem major or instr consent
CHEM 8541 - Dynamics
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 5541/8541
Typically offered: Periodic Fall
Mathematical methods for physical chemistry. Classical mechanics/dynamics, normal modes of vibration. Special topics such as rotational motion, Langevin equation, Brownian motion, time correlation functions, collision theory, cross sections, energy transfer, molecular forces, potential energy surfaces, classical electrostatics, Shannon entropy. prereq: Undergrad physical chem course
CHEM 8551 - Quantum Mechanics I
Credits: 4.0 [max 4.0]
Course Equivalencies: Chem 5551/8551
Typically offered: Every Fall
Review of classical mechanics. Postulates of quantum mechanics with applications to determination of single particle bound state energies and scattering cross-sections in central field potentials. Density operator formalism with applications to description of two level systems, two particle systems, entanglement, and Bell inequality. prereq: undergrad physical chem course
CHEM 8552 - Quantum Mechanics II
Credits: 2.0 [max 4.0]
Typically offered: Every Spring
Second Quantization;Density matrices; Molecular Electronic Structure Theory; Hartree-Fock Theory; Electron Correlation; Configuration Interaction; Perturbation Theory; Energy Derivatives; Coupled-Cluster;Density Functional Theory; Relativistic Quantum Chemistry; prereq: 8551
CHEM 8561 - Thermodynamics, Statistical Mechanics, and Reaction Dynamics I
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Two-part sequence. Thermodynamics, equilibrium statistical mechanics, ensemble theory, partition functions. Applications, including ideal gases/crystals. Theories of simple liquids, Monte Carlo, and molecular dynamics simulations. Reaction dynamics from microscopic viewpoint. prereq: undergrad physical chem course
CHEM 8562 - Thermodynamics, Statistical Mechanics, and Reaction Dynamics II
Credits: 4.0 [max 4.0]
Typically offered: Every Spring
Two-part sequence. Thermodynamics, equilibrium statistical mechanics, ensemble theory, partition functions. Applications, including ideal gases/crystals. Theories of simple liquids, Monte Carlo, and molecular dynamics simulations. Reaction dynamics from microscopic viewpoint. prereq: 8561
CHEM 8563 - Molecular Simulations
Credits: 2.0 [max 2.0]
Typically offered: Every Spring
Principles of Monte Carlo/molecular dynamics simulations. Algorithms, simulation set-up/analysis, applications to chemical systems. Hands-on computational project that requires writing of computer code. prereq: grad chem major or instr consent
CHEM 8564 - Laser Spectroscopy
Credits: 2.0 [max 2.0]
Typically offered: Every Spring
Fundamentals of light-molecule interactions/manifestation in spectroscopic observables. Time correlation functions, spectroscopic lineshapes, linear/nonlinear material responses, material susceptibilities. Role of lasers in measuring quantities. prereq: grad chem major or instr consent
CHEM 8565 - Chemical Reaction Dynamics
Credits: 2.0 [max 2.0]
Typically offered: Periodic Spring
Fundamentals of chemical reaction dynamics including potential energy surfaces, collision theory, statistical mechanical background and transition state theory, variational transition state theory, activation energy, tunneling, unimolecular reactions, energy transfer, reactions in solution, solvation free energy, potential of mean force, quasithermodynamic treatment, reactions in solution, diffusion control, Kramers’ theory, and photochemistry
CHEM 8566 - Spin Dynamics
Credits: 2.0 [max 2.0]
Typically offered: Periodic Spring
Chemistry 8566 is a 1/2-semester course on spin dynamics. The course prerequisites are described in the CSE Bulletin. Briefly, they are: one year of college-level chemistry, one year of college-level physics, and one year of college-level calculus. All of the prerequisites should have been completed before enrollment in this course. Students who do not satisfy the course prerequisites, please contact the instructor.
CHEM 8567 - Biophysical Chemistry
Credits: 2.0 [max 2.0]
Typically offered: Periodic Spring
CHEM 8567 is a graduate level course which emphasizes how macromolecular and membrane structure and dynamics impact biological function. Topics to be covered include high-resolution structure determination, biomolecular spectroscopy, and microscopy as applied to folding, solvation, and reaction dynamics. The objectives for this course are to become well-versed in the language of biophysics, at a level sufficient to understand and critically evaluate the literature and to understand fundamental concepts related to structure determination and structure-function relationships of biomolecules, and to be able to apply those concepts to a variety of biological systems.
CHEM 8568 - Chemical Bonding at Surfaces
Credits: 2.0 [max 2.0]
Typically offered: Periodic Spring
A brief overview of surface science, chemical reactions at surfaces, and interactions of surfaces with light. Students will also be exposed to physical principles of chemical reactions such as transition-state theory and kinetics in within the framework of surface science.
CHEM 8569 - Electronic Structure
Credits: 2.0 [max 2.0]
Typically offered: Periodic Spring
This course covers electronic structure theory applied to atoms and molecules and includes a hands-on computational project that requires writing of computer code. It will cover Hartree-Fock theory, Density Functional Theory, electron correlation theories, relativistic effects, and other related topics.
CHEM 8580 - Special Topics in Physical Chemistry
Credits: 2.0 -4.0 [max 8.0]
Typically offered: Periodic Spring
Topics (and availability) vary depending on instructor and development of the field. prereq: grad chem major or instr consent
CHEM 8715 - Physical Inorganic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Every Fall
Physical methods and concepts applied to inorganic and organometallic systems, including many of the following methods: NMR, IR, UV-VIS, ESR, M[ö]ssbauer and mass spectroscopy, magnetic measurements, X-ray diffraction. prereq: 4701 or equiv, grad chem major or instr consent
CHEM 8725 - Organometallic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Periodic Fall
Synthesis, reactions, structures, and other important properties of main group and transition metal organometallic compounds; treatment in terms of modern electronic and structural theory; emphasis on their use as stoichiometric and homogeneous catalytic reagents in organic and inorganic systems. prereq: 4701 or equiv, grad chem major or instr consent
CHEM 8735 - Bioinorganic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Periodic Fall
Survey of role of metal ions in biology; emphasizes structure, function, and spectroscopy of metalloproteins and their synthetic analogs. prereq: 4701 or equiv, grad chem major or instr consent
CHEM 8745 - Advanced Inorganic Chemistry
Credits: 4.0 [max 4.0]
Typically offered: Periodic Spring
Survey of topics in main group and transition metal chemistry; emphasizes synthesis, structure, physical properties, and chemical reactivity. prereq: 8715, grad chem major or instr consent
CHEM 8780 - Special Topics in Inorganic Chemistry
Credits: 2.0 -4.0 [max 4.0]
Typically offered: Periodic Fall
Topics (and availability) vary by year depending on instructor and development of the field. prereq: Grad chem major or instr consent
CHEM 8880 - Special Topics in Chemistry
Credits: 2.0 -4.0 [max 4.0]
Typically offered: Every Spring
Topics (and availability) vary depending on instructor and development of the field. prereq: Grad chem major or instr consent
CHEN 5771 - Colloids and Dispersions
Credits: 3.0 [max 3.0]
Course Equivalencies: ChEn 5771/MatS 5771
Grading Basis: A-F or Aud
Typically offered: Every Fall
Preparation, stability, coagulation kinetics or colloidal solutions. DLVO theory, electrokinetic phenomena. Properties of micelles, other microstructures. prereq: Physical chemistry
CHEN 8754 - Systems Analysis of Biological Processes
Credits: 3.0 [max 3.0]
Typically offered: Every Spring
Relating biological processes at molecular level to physiological level of cells/organisms/populations. Methodology for analyzing data. Quantification of molecular interplays. prereq: Grad student in [life sciences or chemical/physical sciences or engineering]; ChEn students must take A/F
CSCI 4041 - Algorithms and Data Structures
Credits: 4.0 [max 4.0]
Course Equivalencies: CSci 4041/CSci 4041H
Typically offered: Every Fall & Spring
Rigorous analysis of algorithms/implementation. Algorithm analysis, sorting algorithms, binary trees, heaps, priority queues, heapsort, balanced binary search trees, AVL trees, hash tables and hashing, graphs, graph traversal, single source shortest path, minimum cost spanning trees. prereq: [(1913 or 1933) and 2011] or instr consent; cannot be taken for grad CSci cr
CSCI 5521 - Machine Learning Fundamentals
Credits: 3.0 [max 3.0]
Typically offered: Periodic Fall
Problems of pattern recognition, feature selection, measurement techniques. Statistical decision theory, nonstatistical techniques. Automatic feature selection/data clustering. Syntactic pattern recognition. Mathematical pattern recognition/artificial intelligence. Prereq: [2031 or 2033], STAT 3021, and knowledge of partial derivatives
CSCI 5525 - Machine Learning: Analysis and Methods
Credits: 3.0 [max 3.0]
Typically offered: Fall Even Year
Models of learning. Supervised algorithms such as perceptrons, logistic regression, and large margin methods (SVMs, boosting). Hypothesis evaluation. Learning theory. Online algorithms such as winnow and weighted majority. Unsupervised algorithms, dimensionality reduction, spectral methods. Graphical models. prereq: Grad student or instr consent
EE 5640 - Introduction to Nano-Optics
Credits: 3.0 [max 3.0]
Typically offered: Every Fall
This course will cover the physics and technology of nano-optics and plasmonics and their potential applications in biochemical sensing, super-resolution imaging, optical trapping, light emission, and spectroscopy. The following topics will be covered: - Maxwell's equations, E&M of metals - Fresnel's equations, light propagation in periodic media - Physics of surface plasmon waves - Metallic waveguides: metal-insulator-metal vs. insulator-metal-insulator - Optical antennas - Noble metal nanoparticles: Synthesis, optical properties, and applications - Optical biosensors based on surface plasmon resonance (SPR) - Surface enhanced Raman scattering (SERS) - Surface enhanced Infrared Absorption (SEIRA) - Super-resolution imaging and near-field optical microscopy - Light transmission through nano-apertures (extraordinary optical transmission) - Plasmonics at long wavelengths (infrared and terahertz) - Plasmonics in atomically thick materials Knowledge of Maxwell's equations, Matlab, or Mathematica coding is suggested but not required.
ESCI 8401 - Aqueous Environmental Geochemistry
Credits: 3.0 [max 3.0]
Course Equivalencies: ESci 4401/ESci 8401
Typically offered: Every Spring
General principles of solution chemistry applied to geology. Solution-mineral equilibria. Redox processes in natural waters. Geochemistry of hydrothermal fluids. Environmental geochemistry.
MATS 5517 - Microscopy of Materials
Credits: 3.0 [max 3.0]
Grading Basis: A-F or Aud
Typically offered: Every Spring
A basic introduction to electron microscopy (EM) methods and techniques for materials characterization. The course is intended for junior- and senior-level undergraduates and graduate students interested in obtaining a basic understanding of characterization with EM. Topics to be covered include an introduction to instrumentation, basics of scattering theory, and a survey of imaging, diffraction, and analytical measurement techniques. Current and emerging techniques will also be covered, including machine learning and big data for EM and time-resolved measurements. Students will research a specific topic of interest over the course of the semester, culminating in a project paper and a class presentation.
MATS 8003 - Electronic Properties
Credits: 3.0 [max 3.0]
Grading Basis: A-F or Aud
Typically offered: Every Spring
Basic physical theory of bonding in metals, alloys, and semiconductors. Review of modern physics, statistical physics, and solid state physics. Structure of matter emphasizing electronic processes. Techniques for predicting and understanding electronic structure of solids. Transport theory, elementary theory of magnetism, and superconductivity. prereq: instr consent
MATS 8103 - Scattering from Soft Matter
Credits: 2.0 [max 2.0]
Grading Basis: A-F only
Typically offered: Every Fall
This course will treat light scattering (LS), dynamic light scattering (DLS), small angle neutron scattering (SANS), and small angle X-ray scattering (SAXS), with particular emphasis on SANS and DLS. Both fundamental theory and experimental techniques will be developed in detail. The materials focus will be on polymer and colloidal solutions, polymer blends, and block copolymers
ME 8362 - Introduction to Plasma Technology
Credits: 3.0 [max 3.0]
Grading Basis: A-F or Aud
Typically offered: Periodic Spring
Fundamentals of gaseous plasmas. Thermal/nonequilibrium plasmas. Types of plasma generation. Electron energy distribution function. Sheaths, glow discharges, electric arcs, RF plasmas. Steady/unsteady plasmas. Plasma heat transfer. Plasma diagnostics. prereq: 8361
MEDC 8001 - General Principles of Medicinal Chemistry
Credits: 3.0 [max 3.0]
Course Equivalencies: MedC 5700/MedC 8001
Grading Basis: A-F or Aud
Typically offered: Every Fall
Fundamental principles of molecular recognition, physiochemical properties of drugs, drug metabolism and disposition, interaction of molecules with DNA/RNA. prereq: Med chem grad student or instr consent
MEDC 8002 - General Principles of Medicinal Chemistry
Credits: 3.0 [max 3.0]
Course Equivalencies: MedC 5710/MedC 8002
Grading Basis: A-F or Aud
Typically offered: Every Spring
Fundamental principles of molecular recognition, physicochemical properties of drugs, drug metabolism and disposition, interaction of molecules with DNA/RNA. prereq: Med chem grad student or instr consent
MEDC 8070 - The Chemistry and Biology of Infectious Diseases
Credits: 3.0 [max 3.0]
Grading Basis: A-F only
Typically offered: Periodic Fall & Spring
The objectives of this course are to provide a comprehensive overview of antimicrobial agents used in infectious diseases with an emphasis on the underlying foundational principles in chemistry and biology. Antibiotic, antifungal, and antiprotozoal agents will be covered. For each antimicrobial agent, the history, discovery, synthesis, structure-activity relationships, spectrum of activity, clinical uses, mechanism(s) of action, resistance, drug disposition properties, and adverse reactions will be discussed in great detail.
MEDC 8435 - BioAssay & Data Analysis
Credits: 1.0 [max 1.0]
Prerequisites: MEDC 8001 or instructor permission.
Grading Basis: A-F or Aud
Typically offered: Spring Even Year
Emphasis is an intro to bioassay & rodent experimental design approaches, data analysis & basic statistical analysis of corresponding data. Concepts of what instrumentation resources are available within the Department of Medicinal Chemistry & the Institute for Therapeutics Discovery & Development (ITDD), what the corresponding bioassays that can be measured on those resources, considerations & criteria for the development of a new bioassay, how to design basic rodent (mouse & rat) animal experiments including power-analysis (how to predict the number of animals needed for the experiment), as well as data analysis [mean, standard error of the mean (SEM), standard deviation of the mean (SD)] & statistical analysis [student t-test, one-way Anova, two-way Anova, & appropriate post-hoc tests). prereq: MEDC 8001 or instructor permission.
MEDC 8461 - Design of Cancer Therapeutics
Credits: 3.0 [max 3.0]
Grading Basis: A-F only
Typically offered: Spring Even Year
Cancer Drug Therapy is a relatively new field of medicine that has undergone many medical and societal changes over the course of the last 100 years and in particular the last 60 years. The emphasis in this course will be to familiarize the student with the basic concepts of cancer biology and to survey current advanced approaches for the development and design of small molecule, protein and cell based therapeutics for the treatment of cancer.
MEDC 8753 - MOLECULAR TARGETS OF DRUG DISCOVERY
Credits: 3.0 [max 3.0]
Grading Basis: A-F only
Typically offered: Fall Even Year
Structure of biological macromolecules that are targets of drugs. Techniques to accelerate directed drug discovery. Protein structure/interactions. Popular target classes. Computational tools for visualizing/analyzing protein-ligand and protein-protein interactions. Structural characterization at a level sufficient to underpin critical data evaluation. Biophysical techniques to assess weak ligand binding and suitable for fragment-based lead discovery. prereq: 5710 or 8002 or CHEM 5412 or structural biochemistry or instr consent
MICA 8004 - Cellular and Cancer Biology
Credits: 4.0 [max 4.0]
Grading Basis: A-F or Aud
Typically offered: Every Spring
Fundamental concepts in cellular, molecular, and genetic basis of disease. Molecular basis of inflammation and cancer metastasis. Genetic basis for inherited disorders and gene therapy. Molecular mechanisms of pathogenesis. prereq: [One undergrad or grad course each in [biochemistry, cell biology]] or instr consent
MICA 8009 - Biochemical Aspects of Normal and Abnormal Cell Growth and Cell Death
Credits: 2.0 [max 2.0]
Typically offered: Every Spring
Aspects of mechanisms involved in growth control at level of nuclear function. Neoplasia in hormonal cancers (such as prostate cancer) and role of protein phosphorylation in normal and abnormal growth. Mechanisms of cell death via apoptosis and its implications in normal and abnormal proliferation. prereq: 8004 or [BioC 3021, Biol 4004] or instr consent
MICB 4171 - Biology, Genetics, and Pathogenesis of Viruses
Credits: 3.0 [max 3.0]
Course Equivalencies: MicB 4141W/4171
Grading Basis: A-F only
Typically offered: Every Spring
Structure, attachment, entry. Genome replication/mRNA production by RNA viruses. Reverse transcription. DNA virus templates. Replication of DNA virus genomes. Processing of viral pre-mRNA. Translational control. Assembly, host defense, tumor viruses, pathogenesis, HIV, antivirals. prereq: Biol 2003 and Biol 4003 and [MicB 4131 or instructor permission]
PHYS 8001 - Advanced Quantum Mechanics
Credits: 3.0 [max 3.0]
Typically offered: Every Fall
Topics in non-relativistic quantum mechanics; second quantization. Introduction to Diagrammatic and Green's function techniques and to relativistic wave equations. Application of relativistic perturbation theory to particle interactions with electromagnetic field. Invariant interactions of elementary particles. prereq: 5002 or instr consent
PHYS 8711 - Solid-State Physics I
Credits: 3.0 [max 3.0]
Typically offered: Every Fall
Fundamental properties of solids. Electronic structure and transport in metals and semiconductors. Properties of disordered materials. prereq: 4211, 5002 or instr consent
PUBH 6414 - Biostatistical Literacy
Credits: 3.0 [max 3.0]
Grading Basis: A-F only
Typically offered: Every Fall, Spring & Summer
Develop ability to read/interpret statistical results in primary literature. Minimal calculation. No formal training in any statistical programming software. Biostatistical Literacy will cover the fundamental concepts of study design, descriptive statistics, hypothesis testing, confidence intervals, odds ratios, relative risks, adjusted models in multiple linear, logistic and Poisson regression, and survival analysis. The focus will be when to use a given method and how to interpret the results, not the actual computation or computer programming to obtain results from raw data. prereq: MPH or certificate student or environmental health or instr consent
PUBH 6450 - Biostatistics I
Credits: 4.0 [max 4.0]
Grading Basis: A-F only
Typically offered: Every Fall & Spring
This course will cover the fundamental concepts of exploratory data analysis and statistical inference for univariate and bivariate data, including: ? study design and sampling methods, ? descriptive and graphical summaries, ? random variables and their distributions, ? interval estimation, ? hypothesis testing, ? relevant nonparametric methods, ? simple regression/correlation, and ? introduction to multiple regression. There will be a focus on analyzing data using statistical programming software and on communicating the results in short reports. Health science examples from the research literature will be used throughout the course. prereq: [College-level algebra, health sciences grad student] or instr consent
STAT 5021 - Statistical Analysis
Credits: 4.0 [max 4.0]
Typically offered: Every Fall & Spring
Intensive introduction to statistical methods for graduate students needing statistics as a research technique. prereq: college algebra or instr consent; credit will not be granted if credit has been received for STAT 3011
CHEM 8777 - Thesis Credits: Master's
Credits: 1.0 -18.0 [max 50.0]
Grading Basis: No Grade
Typically offered: Every Fall, Spring & Summer
(No description) prereq: Max 18 cr per semester or summer; 10 cr total required [Plan A only]
CHEM 8081 - M.S. Plan B Project I
Credits: 1.0 -4.0 [max 4.0]
Grading Basis: A-F or Aud
Typically offered: Every Fall, Spring & Summer
Satisfies project requirement for Plan B master's degree. May appear on M.S. degree program, but does not count toward 14-credit minimum in major field. Topic arranged by student adviser; written report required. 8081 required; 8082 optional. prereq: grad chem major
CHEM 8082 - M.S. Plan B Project II
Credits: 1.0 -4.0 [max 4.0]
Grading Basis: A-F or Aud
Typically offered: Every Fall, Spring & Summer
Satisfies project requirement for Plan B master's degree. May appear on M.S. degree program, but does not count toward 14-credit minimum in major field. Topic arranged by student adviser; written report required. 8081 required; 8082 optional. prereq: grad chem major